UtilNucleotideSearch class

Constructors

UtilNucleotideSearch()

Properties

hashCode → int

The hash code for this object.

no setter, inherited

runtimeType → Type

A representation of the runtime type of the object.

no setter, inherited

Methods

noSuchMethod(Invocation invocation) → dynamic

Invoked when a nonexistent method or property is accessed.

inherited

toString() → String

A string representation of this object.

inherited

Operators

operator ==(Object other) → bool

The equality operator.

inherited

Static Methods

getPositions(NucleotideSequence seq, NucleotideSequence target, bool compareOnlyBase, {bool fuzzyComp = false}) → List<int>

(en) Returns a list of the indices of the beginning of the pattern where the specified pattern occurs.

tandemRepeat(NucleotideSequence seq, int unitLen, int minRepeat, bool compareOnlyBase, {bool fuzzyComp = false}) → List<List<int>>

(en) Search for tandem repeats (short sequence repeats).