MolecularSequenceReferenceSeq class

MolecularSequenceReferenceSeq Raw data describing a biological

Annotations
  • @freezed

Constructors

MolecularSequenceReferenceSeq({@JsonKey(name: 'id') FhirId? fhirId, @JsonKey(name: 'extension') List<FhirExtension>? extension_, List<FhirExtension>? modifierExtension, CodeableConcept? chromosome, String? genomeBuild, @JsonKey(name: '_genomeBuild') Element? genomeBuildElement, FhirCode? orientation, @JsonKey(name: '_orientation') Element? orientationElement, CodeableConcept? referenceSeqId, Reference? referenceSeqPointer, String? referenceSeqString, @JsonKey(name: '_referenceSeqString') Element? referenceSeqStringElement, FhirCode? strand, @JsonKey(name: '_strand') Element? strandElement, FhirInteger? windowStart, @JsonKey(name: '_windowStart') Element? windowStartElement, FhirInteger? windowEnd, @JsonKey(name: '_windowEnd') Element? windowEndElement})
MolecularSequenceReferenceSeq Raw data describing a biological sequence.
const
factory
MolecularSequenceReferenceSeq.fromJson(Map<String, dynamic> json)
Factory constructor, accepts Map<String, dynamic> as an argument
factory
MolecularSequenceReferenceSeq.fromJsonString(String source)
Acts like a constructor, returns a MolecularSequenceReferenceSeq, accepts a String as an argument, mostly because I got tired of typing it out
factory
MolecularSequenceReferenceSeq.fromYaml(dynamic yaml)
Factory constructor that accepts a String in YAML format as an argument
factory

Properties

chromosome → CodeableConcept?
chromosome Structural unit composed of a nucleic acid molecule which controls its own replication through the interaction of specific proteins at one or more origins of replication (SO:0000340).
no setterinherited
copyWith → $MolecularSequenceReferenceSeqCopyWith<MolecularSequenceReferenceSeq>
no setterinherited
extension_ → List<FhirExtension>?
extension_ May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
no setterinherited
fhirId → FhirId?
id Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
no setterinherited
genomeBuild → String?
genomeBuild The Genome Build used for reference, following GRCh build versions e.g. 'GRCh 37'. Version number must be included if a versioned release of a primary build was used.
no setterinherited
genomeBuildElement → Element?
genomeBuildElement Extensions for genomeBuild
no setterinherited
hashCode → int
The hash code for this object.
no setterinherited
modifierExtension → List<FhirExtension>?
modifierExtension May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).
no setterinherited
orientation → FhirCode?
orientation A relative reference to a DNA strand based on gene orientation. The strand that contains the open reading frame of the gene is the "sense" strand, and the opposite complementary strand is the "antisense" strand.
no setterinherited
orientationElement → Element?
orientationElement Extensions for orientation
no setterinherited
referenceSeqId → CodeableConcept?
referenceSeqId Reference identifier of reference sequence submitted to NCBI. It must match the type in the MolecularSequence.type field. For example, the prefix, “NG_” identifies reference sequence for genes, “NM_” for messenger RNA transcripts, and “NP_” for amino acid sequences.
no setterinherited
referenceSeqPointer → Reference?
referenceSeqPointer A pointer to another MolecularSequence entity as reference sequence.
no setterinherited
referenceSeqString → String?
referenceSeqString A string like "ACGT".
no setterinherited
referenceSeqStringElement → Element?
referenceSeqStringElement Extensions for referenceSeqString
no setterinherited
runtimeType → Type
A representation of the runtime type of the object.
no setterinherited
strand → FhirCode?
strand An absolute reference to a strand. The Watson strand is the strand whose 5'-end is on the short arm of the chromosome, and the Crick strand as the one whose 5'-end is on the long arm.
no setterinherited
strandElement → Element?
strandElement Extensions for strand
no setterinherited
windowEnd → FhirInteger?
windowEnd End position of the window on the reference sequence. If the coordinate system is 0-based then end is exclusive and does not include the last position. If the coordinate system is 1-base, then end is inclusive and includes the last position.
no setterinherited
windowEndElement → Element?
windowEndElement Extensions for windowEnd
no setterinherited
windowStart → FhirInteger?
windowStart Start position of the window on the reference sequence. If the coordinate system is either 0-based or 1-based, then start position is inclusive.
no setterinherited
windowStartElement → Element?
windowStartElement Extensions for windowStart
no setterinherited

Methods

noSuchMethod(Invocation invocation) → dynamic
Invoked when a nonexistent method or property is accessed.
inherited
toJson() → Map<String, dynamic>
inherited
toJsonString() → String
Another convenience method because more and more I'm transmitting FHIR data as a String and not a Map
toString() → String
A string representation of this object.
inherited
toYaml() → String
Produces a Yaml formatted String version of the object

Operators

operator ==(Object other) → bool
The equality operator.
inherited