MolecularSequence class
MolecularSequence Representation of a molecular sequence.
- Mixed in types
- Annotations
-
- @freezed
Constructors
-
MolecularSequence({@Default(R5ResourceType.MolecularSequence) @JsonKey(unknownEnumValue: R5ResourceType.MolecularSequence) R5ResourceType resourceType, @JsonKey(includeFromJson: true, includeToJson: false) int? dbId, @JsonKey(name: 'id') FhirId? fhirId, FhirMeta? meta, FhirUri? implicitRules, @JsonKey(name: '_implicitRules') Element? implicitRulesElement, FhirCode? language, @JsonKey(name: '_language') Element? languageElement, Narrative? text, List<
Resource> ? contained, @JsonKey(name: 'extension') List<FhirExtension> ? extension_, List<FhirExtension> ? modifierExtension, List<Identifier> ? identifier, FhirCode? type, @JsonKey(name: '_type') Element? typeElement, Reference? subject, List<Reference> ? focus, Reference? specimen, Reference? device, Reference? performer, String? literal, @JsonKey(name: '_literal') Element? literalElement, List<Attachment> ? formatted, List<MolecularSequenceRelative> ? relative}) -
MolecularSequence Representation of a molecular sequence.
constfactory
-
MolecularSequence.fromJson(Map<
String, dynamic> json) -
Factory constructor, accepts Map<String, dynamic> as an argument
factory
- MolecularSequence.fromJsonString(String source)
-
Acts like a constructor, returns a MolecularSequence, accepts a
String as an argument, mostly because I got tired of typing it out
factory
- MolecularSequence.fromYaml(dynamic yaml)
-
Factory constructor that accepts a String in YAML format as an argument
factory
Properties
-
contained
→ List<
Resource> ? -
contained These resources do not have an independent existence apart
from the resource that contains them - they cannot be identified
independently, nor can they have their own independent transaction
scope. This is allowed to be a Parameters resource if and only if it
is referenced by a resource that provides context/meaning.
no setterinherited
-
copyWith
→ $MolecularSequenceCopyWith<
MolecularSequence> -
no setterinherited
- dbId → int?
-
no setterinherited
- device → Reference?
-
device The method for sequencing, for example, chip information.
no setterinherited
-
extension_
→ List<
FhirExtension> ? -
extension_ ("extension") May be used to represent additional
information that is not part of the basic definition of the resource.
To make the use of extensions safe and managable, there is a strict
set of governance applied to the definition and use of extensions.
Though any implementer can define an extension, there is a set of
requirements that SHALL be met as part of the definition of the
extension.
no setterinherited
- fhirId → FhirId?
-
id The logical id of the resource, as used in the URL for the
resource. Once assigned, this value never changes.
no setterinherited
-
focus
→ List<
Reference> ? -
focus The actual focus of a molecular sequence when it is not the
patient of record representing something or someone associated with
the patient such as a spouse, parent, child, or sibling. For example,
in trio testing, the subject would be the child (proband) and the
focus would be the parent.
no setterinherited
-
formatted
→ List<
Attachment> ? -
formatted Sequence that was observed as file content. Can be an
actual file contents, or referenced by a URL to an external system.
no setterinherited
- hashCode → int
-
The hash code for this object.
no setterinherited
-
identifier
→ List<
Identifier> ? -
identifier A unique identifier for this particular sequence instance.
no setterinherited
- implicitRules → FhirUri?
-
implicitRules A reference to a set of rules that were followed when
the resource was constructed, and which must be understood when
processing the content. Often, this is a reference to an
implementation guide that defines the special rules along with other
profiles etc.
no setterinherited
- implicitRulesElement → Element?
-
implicitRulesElement ("_implicitRules") Extensions for implicitRules
no setterinherited
- language → FhirCode?
-
language The base language in which the resource is written.
no setterinherited
- languageElement → Element?
-
languageElement ("_language") Extensions for language
no setterinherited
- literal → String?
-
literal Sequence that was observed.
no setterinherited
- literalElement → Element?
-
literalElement ("_literal") Extensions for literal
no setterinherited
- meta → FhirMeta?
-
meta The metadata about the resource. This is content that is
maintained by the infrastructure. Changes to the content might not
always be associated with version changes to the resource.
no setterinherited
-
modifierExtension
→ List<
FhirExtension> ? -
modifierExtension May be used to represent additional information
that is not part of the basic definition of the resource and that
modifies the understanding of the element that contains it and/or the
understanding of the containing element's descendants. Usually
modifier elements provide negation or qualification. To make the use
of extensions safe and managable, there is a strict set of governance
applied to the definition and use of extensions. Though any
implementer is allowed to define an extension, there is a set of
requirements that SHALL be met as part of the definition of the
extension. Applications processing a resource are required to check
for modifier extensions.Modifier extensions SHALL NOT change the
meaning of any elements on Resource or DomainResource (including
cannot change the meaning of modifierExtension itself).
no setterinherited
- path → String
-
Local Reference for this Resource, form is "ResourceType/Id"
no setterinherited
- performer → Reference?
-
performer The organization or lab that should be responsible for this
result.
no setterinherited
-
relative
→ List<
MolecularSequenceRelative> ? -
relative A sequence defined relative to another sequence.
no setterinherited
- resourceType → R5ResourceType
-
resourceType This is a MolecularSequence resource
no setterinherited
- resourceTypeString → String?
-
produce a string of the resourceType
no setterinherited
- runtimeType → Type
-
A representation of the runtime type of the object.
no setterinherited
- specimen → Reference?
-
specimen Specimen used for sequencing.
no setterinherited
- subject → Reference?
-
subject Indicates the subject this sequence is associated too.
no setterinherited
- text → Narrative?
-
text A human-readable narrative that contains a summary of the
resource and can be used to represent the content of the resource to a
human. The narrative need not encode all the structured data, but is
required to contain sufficient detail to make it "clinically safe" for
a human to just read the narrative. Resource definitions may define
what content should be represented in the narrative to ensure clinical
safety.
no setterinherited
- thisReference → Reference
-
Convenience method to return a Reference referring to that Resource
no setterinherited
- type → FhirCode?
-
type Amino Acid Sequence/ DNA Sequence / RNA Sequence.
no setterinherited
- typeElement → Element?
-
typeElement ("_type") Extensions for type
no setterinherited
Methods
-
newId(
) → Resource -
returns the same resource with a new ID (even if there is already an ID
present)
inherited
-
newIdIfNoId(
) → Resource -
returns the same resource with a new ID if there is no current ID
inherited
-
noSuchMethod(
Invocation invocation) → dynamic -
Invoked when a nonexistent method or property is accessed.
inherited
-
toDbJson(
) → Map< String, dynamic> -
The normal toJson ignores the dbId, and produces the fhirId as the id
However, if you're going to use this as a database entry, you have to
switch those two ids
inherited
-
toJson(
) → Map< String, dynamic> -
inherited
-
toJsonString(
) → String -
Another convenience method because more and more I'm transmitting FHIR
data as a String and not a Map
override
-
toString(
) → String -
A string representation of this object.
inherited
-
toYaml(
) → String -
Produces a Yaml formatted String version of the object
override
-
updateVersion(
{FhirMeta? oldMeta}) → Resource -
Updates the meta field of this Resource, updates the meta.lastUpdated
field, adds 1 to the version number
inherited
Operators
-
operator ==(
Object other) → bool -
The equality operator.
inherited