GenomicStudyAnalysis constructor

const GenomicStudyAnalysis({ @JsonKey(name: 'id') String? fhirId, @JsonKey(name: 'extension') List<FhirExtension>? extension_, List<FhirExtension>? modifierExtension, List<Identifier>? identifier, List<CodeableConcept>? methodType, List<CodeableConcept>? changeType, CodeableConcept? genomeBuild, FhirCanonical? instantiatesCanonical, FhirUri? instantiatesUri, @JsonKey(name: '_instantiatesUri') Element? instantiatesUriElement, String? title, @JsonKey(name: '_title') Element? titleElement, List<Reference>? focus, List<Reference>? specimen, FhirDateTime? date, @JsonKey(name: '_date') Element? dateElement, List<Annotation>? note, Reference? protocolPerformed, List<Reference>? regionsStudied, List<Reference>? regionsCalled, List<GenomicStudyInput>? input, List<GenomicStudyOutput>? output, List<GenomicStudyPerformer>? performer, List<GenomicStudyDevice>? device, })

GenomicStudyAnalysis A GenomicStudy is a set of analyses performed to analyze and generate genomic data.

id Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.

extension_ ("extension") May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

modifierExtension May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).

identifier Identifiers for the analysis event.

methodType Type of the methods used in the analysis, e.g., Fluorescence in situ hybridization (FISH), Karyotyping, or Microsatellite instability testing (MSI).

changeType Type of the genomic changes studied in the analysis, e.g., DNA, RNA, or amino acid change.

genomeBuild The reference genome build that is used in this analysis.

instantiatesCanonical The defined protocol that describes the analysis.

instantiatesUri The URL pointing to an externally maintained protocol that describes the analysis.

instantiatesUriElement ("_instantiatesUri") Extensions for instantiatesUri

title Name of the analysis event (human friendly).

titleElement ("_title") Extensions for title

focus The focus of a genomic analysis when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, child, or sibling. For example, in trio testing, the GenomicStudy.subject would be the child (proband) and the GenomicStudy.analysis.focus of a specific analysis would be the parent.

specimen The specimen used in the analysis event.

date The date of the analysis event.

dateElement ("_date") Extensions for date

note Any notes capture with the analysis event.

protocolPerformed The protocol that was performed for the analysis event.

regionsStudied The genomic regions to be studied in the analysis (BED file).

regionsCalled Genomic regions actually called in the analysis event (BED file).

input Inputs for the analysis event.

output Outputs for the analysis event.

performer Performer for the analysis event.

device Devices used for the analysis (e.g., instruments, software), with settings and parameters.

Implementation

const factory GenomicStudyAnalysis({
  /// [id] Unique id for the element within a resource (for internal
  ///  references). This may be any string value that does not contain spaces.
  @JsonKey(name: 'id') String? fhirId,

  /// [extension_] ("extension") May be used to represent additional
  ///  information that is not part of the basic definition of the element.
  ///  To make the use of extensions safe and managable, there is a strict
  ///  set of governance applied to the definition and use of extensions.
  ///  Though any implementer can define an extension, there is a set of
  ///  requirements that SHALL be met as part of the definition of the
  ///  extension.
  @JsonKey(name: 'extension') List<FhirExtension>? extension_,

  /// [modifierExtension] May be used to represent additional information
  ///  that is not part of the basic definition of the element and that
  ///  modifies the understanding of the element in which it is contained
  ///  and/or the understanding of the containing element's descendants.
  ///  Usually modifier elements provide negation or qualification. To make
  ///  the use of extensions safe and managable, there is a strict set of
  ///  governance applied to the definition and use of extensions. Though any
  ///  implementer can define an extension, there is a set of requirements
  ///  that SHALL be met as part of the definition of the extension.
  ///  Applications processing a resource are required to check for modifier
  ///  extensions.Modifier extensions SHALL NOT change the meaning of any
  ///  elements on Resource or DomainResource (including cannot change the
  ///  meaning of modifierExtension itself).
  List<FhirExtension>? modifierExtension,

  /// [identifier] Identifiers for the analysis event.
  List<Identifier>? identifier,

  /// [methodType] Type of the methods used in the analysis, e.g.,
  ///  Fluorescence in situ hybridization (FISH), Karyotyping, or
  ///  Microsatellite instability testing (MSI).
  List<CodeableConcept>? methodType,

  /// [changeType] Type of the genomic changes studied in the analysis, e.g.,
  ///  DNA, RNA, or amino acid change.
  List<CodeableConcept>? changeType,

  /// [genomeBuild] The reference genome build that is used in this analysis.
  CodeableConcept? genomeBuild,

  /// [instantiatesCanonical] The defined protocol that describes the
  ///  analysis.
  FhirCanonical? instantiatesCanonical,

  /// [instantiatesUri] The URL pointing to an externally maintained protocol
  ///  that describes the analysis.
  FhirUri? instantiatesUri,

  /// [instantiatesUriElement] ("_instantiatesUri") Extensions for
  ///  instantiatesUri
  @JsonKey(name: '_instantiatesUri') Element? instantiatesUriElement,

  /// [title] Name of the analysis event (human friendly).
  String? title,

  /// [titleElement] ("_title") Extensions for title
  @JsonKey(name: '_title') Element? titleElement,

  /// [focus] The focus of a genomic analysis when it is not the patient of
  ///  record representing something or someone associated with the patient
  ///  such as a spouse, parent, child, or sibling. For example, in trio
  ///  testing, the GenomicStudy.subject would be the child (proband) and the
  ///  GenomicStudy.analysis.focus of a specific analysis would be the parent.
  List<Reference>? focus,

  /// [specimen] The specimen used in the analysis event.
  List<Reference>? specimen,

  /// [date] The date of the analysis event.
  FhirDateTime? date,

  /// [dateElement] ("_date") Extensions for date
  @JsonKey(name: '_date') Element? dateElement,

  /// [note] Any notes capture with the analysis event.
  List<Annotation>? note,

  /// [protocolPerformed] The protocol that was performed for the analysis
  ///  event.
  Reference? protocolPerformed,

  /// [regionsStudied] The genomic regions to be studied in the analysis (BED
  ///  file).
  List<Reference>? regionsStudied,

  /// [regionsCalled] Genomic regions actually called in the analysis event
  ///  (BED file).
  List<Reference>? regionsCalled,

  /// [input] Inputs for the analysis event.
  List<GenomicStudyInput>? input,

  /// [output] Outputs for the analysis event.
  List<GenomicStudyOutput>? output,

  /// [performer] Performer for the analysis event.
  List<GenomicStudyPerformer>? performer,

  /// [device] Devices used for the analysis (e.g., instruments, software),
  ///  with settings and parameters.
  List<GenomicStudyDevice>? device,
}) = _GenomicStudyAnalysis;